| 1.0 |
The executable for SETLyze (setlyze.pyw). |
| 1.1 |
The main() function in the executable. |
| 1.2 |
setlyze.database.MakeLocalDB |
| 1.3 |
setlyze.analysis.spot_preference |
| 1.3.1 |
setlyze.analysis.spot_preference.Begin |
| 1.3.2 |
setlyze.analysis.spot_preference.BeginBatch |
| 1.3.3 |
setlyze.analysis.spot_preference.Analysis |
| 1.4 |
setlyze.analysis.attraction_intra |
| 1.4.1 |
setlyze.analysis.attraction_intra.Begin |
| 1.4.2 |
setlyze.analysis.attraction_intra.BeginBatch |
| 1.4.3 |
setlyze.analysis.attraction_intra.Analysis |
| 1.5 |
setlyze.analysis.attraction_inter |
| 1.5.1 |
setlyze.analysis.attraction_inter.Begin |
| 1.5.2 |
setlyze.analysis.attraction_inter.BeginBatch |
| 1.5.3 |
setlyze.analysis.attraction_inter.Analysis |
| 1.11 |
setlyze.gui.SelectionWindow.on_load_data() |
| 1.12 |
setlyze.report.Report |
| 1.13 |
setlyze.analysis.spot_preference.Analysis.generate_report() |
| 1.14 |
setlyze.analysis.attraction_intra.Analysis.generate_report() |
| 1.15 |
setlyze.analysis.attraction_inter.Analysis.generate_report() |
| 1.17 |
setlyze.report.export() |
| 1.19.1 |
setlyze.database.AccessLocalDB.set_species_spots() |
| 1.20 |
setlyze.database.AccessDBGeneric.make_plates_unique() |
| 1.22 |
setlyze.analysis.attraction_intra.Analysis.calculate_distances_intra() |
| 1.23 |
setlyze.analysis.attraction_intra.Analysis.calculate_distances_intra_expected() |
| 1.24 |
setlyze.analysis.attraction_intra.Analysis.calculate_significance() |
| 1.27 |
setlyze.analysis.attraction_inter.Analysis.calculate_distances_inter() |
| 1.28 |
setlyze.database.AccessLocalDB |
| 1.29 |
setlyze.database.AccessRemoteDB |
| 1.31 |
setlyze.database.MakeLocalDB.run() |
| 1.32 |
setlyze.database.MakeLocalDB.insert_from_data_files() |
| 1.33 |
setlyze.database.MakeLocalDB.insert_from_db() |
| 1.34.1 |
setlyze.database.MakeLocalDB.insert_locations_from_csv() |
| 1.34.2 |
setlyze.database.MakeLocalDB.insert_locations_from_xls() |
| 1.35.1 |
setlyze.database.MakeLocalDB.insert_species_from_csv() |
| 1.35.2 |
setlyze.database.MakeLocalDB.insert_species_from_xls() |
| 1.36.1 |
setlyze.database.MakeLocalDB.insert_plates_from_csv() |
| 1.36.2 |
setlyze.database.MakeLocalDB.insert_plates_from_xls() |
| 1.37.1 |
setlyze.database.MakeLocalDB.insert_records_from_csv() |
| 1.37.2 |
setlyze.database.MakeLocalDB.insert_records_from_xls() |
| 1.38 |
setlyze.database.MakeLocalDB.create_new_db() |
| 1.39 |
setlyze.gui.SelectionWindow.update_tree() |
| 1.41.1 |
setlyze.database.AccessLocalDB.get_record_ids() |
| 1.42 |
setlyze.gui.SelectLocations.create_model() |
| 1.43 |
setlyze.gui.SelectSpecies.create_model() |
| 1.44 |
setlyze.gui.SelectionWindow.on_continue() |
| 1.45 |
setlyze.gui.SelectionWindow.on_back() |
| 1.48 |
setlyze.report.Report |
| 1.50 |
setlyze.report.Report.set_location_selections() |
| 1.51 |
setlyze.report.Report.set_species_selections() |
| 1.52 |
setlyze.report.Report.set_spot_distances_observed() |
| 1.53 |
setlyze.report.Report.set_spot_distances_expected() |
| 1.54 |
setlyze.report.Report.set_plate_areas_definition() |
| 1.55 |
setlyze.report.Report.set_area_totals_observed() |
| 1.56 |
setlyze.report.Report.set_area_totals_expected() |
| 1.57 |
setlyze.config.ConfigManager |
| 1.58 |
setlyze.analysis.spot_preference.Analysis.run() |
| 1.59 |
setlyze.analysis.attraction_intra.Analysis.run() |
| 1.60 |
setlyze.analysis.attraction_inter.Analysis.run() |
| 1.62 |
setlyze.analysis.spot_preference.Analysis.set_plate_area_totals_observed() |
| 1.63 |
setlyze.analysis.spot_preference.Analysis.set_plate_area_totals_expected() |
| 1.64 |
setlyze.analysis.spot_preference.Analysis.get_defined_areas_totals_observed() |
| 1.65 |
setlyze.analysis.spot_preference.Analysis.repeat_wilcoxon_test() |
| 1.68 |
setlyze.analysis.common.PrepareAnalysis.on_display_results() |
| 1.69 |
setlyze.analysis.attraction_inter.Analysis.calculate_distances_inter_expected() |
| 1.70 |
setlyze.report.Report.set_statistics() |
| 1.72 |
setlyze.report.Report.set_analysis() |
| 1.73 |
setlyze.database.AccessDBGeneric.fill_plate_spot_totals_table() |
| 1.74 |
setlyze.analysis.attraction_inter.Analysis.calculate_significance() |
| 1.75 |
setlyze.database.MakeLocalDB.create_table_info() |
| 1.76 |
setlyze.database.MakeLocalDB.create_table_localities() |
| 1.77 |
setlyze.database.MakeLocalDB.create_table_species() |
| 1.78 |
setlyze.database.MakeLocalDB.create_table_plates() |
| 1.79 |
setlyze.database.MakeLocalDB.create_table_records() |
| 1.80 |
setlyze.database.AccessLocalDB.create_table_species_spots_1() |
| 1.81 |
setlyze.database.AccessLocalDB.create_table_species_spots_2() |
| 1.83 |
setlyze.database.AccessLocalDB.create_table_spot_distances_observed() |
| 1.84 |
setlyze.database.AccessLocalDB.create_table_spot_distances_expected() |
| 1.85 |
setlyze.database.AccessLocalDB.create_table_plate_spot_totals() |
| 1.86 |
setlyze.gui.SelectAnalysis |
| 1.87 |
setlyze.gui.SelectLocations |
| 1.88 |
setlyze.gui.SelectSpecies |
| 1.89 |
setlyze.gui.Report |
| 1.90 |
setlyze.gui.LoadData |
| 1.91 |
setlyze.gui.DefinePlateAreas |
| 1.92 |
setlyze.gui.ProgressDialog |
| 1.93 |
setlyze.database.get_database_accessor() |
| 1.94 |
setlyze.std.Sender |
| 1.95 |
setlyze.database.AccessDBGeneric.get_locations() |
| 1.96 |
setlyze.database.AccessLocalDB.get_species() |
| 1.98 |
setlyze.analysis.spot_preference.Analysis.calculate_significance_wilcoxon() |
| 1.99 |
setlyze.analysis.spot_preference.Analysis.calculate_significance_chisq() |
| 1.100 |
setlyze.analysis.spot_preference.Analysis.wilcoxon_test_for_repeats() |
| 1.101 |
setlyze.analysis.spot_preference.Analysis.get_area_probabilities() |
| 1.102 |
setlyze.analysis.attraction_intra.Analysis.wilcoxon_test_for_repeats() |
| 1.103 |
setlyze.analysis.attraction_intra.Analysis.repeat_wilcoxon_test() |
| 1.104 |
setlyze.analysis.attraction_inter.Analysis.wilcoxon_test_for_repeats() |
| 1.105 |
setlyze.analysis.attraction_inter.Analysis.repeat_wilcoxon_test() |